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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78017186_78018203_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78017186 - 78018203

Intron Length:

1018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TATCTCTTTATT

Flanking Amino Acid:

SRTVQFLVPQTISEEMFYQL

Intron Amino Acid Position:

534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

80.4

30.1

Major BPS

83.9

0.84

73.9

41.3

Major PPT

77.6

0.62

0.7

69.6

31.2

Minor 5ss

38.4

-1.3

49.1

47.1

Minor BPS

62.1

0.46

1.6

78.1

38.4

Associated Gene:

Gene:

C12orf4

Ensembl Gene ID:

ENSAPLG00000003055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003130

78016935 - 78039920

22986