Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_78026485_78028625_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78026485 - 78028625

Intron Length:

2141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTCAGTGAC

5'SS Class:

major

3'SS Sequence:

TGTTTATATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TGTTTCATATTT

Flanking Amino Acid:

QRSSKSKRHHGNKESGTEDK

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.3

68.5

36.9

Major BPS

79.2

0.73

75.3

39.4

Major PPT

79.4

0.66

73.8

Minor 5ss

28.5

-2.5

32.2

36.2

Minor BPS

55.1

0.24

1.9

77.23

39.4

Associated Gene:

Gene:

C12orf4

Ensembl Gene ID:

ENSAPLG00000003055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003130

78016935 - 78039920

22986