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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78033236_78034622_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78033236 - 78034622

Intron Length:

1387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTAGT

5'SS Class:

major

3'SS Sequence:

CTCATTATTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATTATTT

Flanking Amino Acid:

DLKNPNNSSISDEIKVQPSQ

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

76.3

38.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

75.9

0.58

0.8

73.8

35.4

Minor 5ss

43.6

-0.7

2.6

60.7

43.6

Minor BPS

61.4

0.44

1.9

80.9

41.2

Associated Gene:

Gene:

C12orf4

Ensembl Gene ID:

ENSAPLG00000003055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003130

78016935 - 78039920

22986