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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78034938_78037876_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

78034938 - 78037876

Intron Length:

2939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTCTGC

5'SS Class:

weak_major

3'SS Sequence:

CCTTTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TTATTTGTAAAT

Flanking Amino Acid:

RDVELKKLRERQGAEMDKVM

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

58.6

41.4

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

0.83

0.7

84.5

23.4

Minor 5ss

51.3

0.05

2.4

68.4

42.5

Minor BPS

53.9

0.2

2.1

77.29

39.3

Associated Gene:

Gene:

C12orf4

Ensembl Gene ID:

ENSAPLG00000003055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003130

78016935 - 78039920

22986

ENSAPLT00000024908

78033951 - 78039901

5951