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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78038059_78039274_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78038059 - 78039274

Intron Length:

1216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGACTA

5'SS Class:

strong_major

3'SS Sequence:

TTATAATTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TCTCTTATAATT

Flanking Amino Acid:

ADAWSKAYKETTLEYAKPEE

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

80.8

33.7

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

77.2

0.61

0.9

74.8

39.6

Minor 5ss

35.5

-1.6

3.2

47.7

Minor BPS

56.3

0.28

1.6

73.4

Associated Gene:

Gene:

C12orf4

Ensembl Gene ID:

ENSAPLG00000003055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024908

78033951 - 78039901

5951

ENSAPLT00000003130

78016935 - 78039920

22986