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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78039421_78039703_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78039421 - 78039703

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTATAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTGTTATAATA

Flanking Amino Acid:

LHNLPCFIENDLKQSLSKFI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

77.2

37.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

74.3

0.55

0.9

71.1

38.5

Minor 5ss

-1.3

3.3

54.4

43.7

Minor BPS

56.9

0.21

1.7

71.1

35.7

Associated Gene:

Gene:

C12orf4

Ensembl Gene ID:

ENSAPLG00000003055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024908

78033951 - 78039901

5951

ENSAPLT00000003130

78016935 - 78039920

22986