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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78043269_78043601_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

78043269 - 78043601

Intron Length:

333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTATTTTA

5'SS Class:

major

3'SS Sequence:

GATCCTAAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATT

Flanking Amino Acid:

ILEVQNSEEQGKKIESENRR

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.2

78.1

32.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

58.3

0.19

1.1

52.3

40.4

Minor 5ss

40.2

-1.1

2.7

50.8

45.5

Minor BPS

80.4

1.03

0.9

89.47

28.1

Associated Gene:

Gene:

RAD51AP1

Ensembl Gene ID:

ENSAPLG00000003097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003139

78040073 - 78048577

8505