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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78043671_78044310_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78043671 - 78044310

Intron Length:

640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TTTGGATTAATT

Flanking Amino Acid:

TNCSVDSELLGLDQVLHDDI

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

0.6

1.2

75.9

36.3

Major PPT

85.4

0.8

0.7

84.5

30.4

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

56.2

0.27

2.1

80.74

41.5

Associated Gene:

Gene:

RAD51AP1

Ensembl Gene ID:

ENSAPLG00000003097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003139

78040073 - 78048577

8505