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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78064073_78071811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

78064073 - 78071811

Intron Length:

7739

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAATG

5'SS Class:

strong_major

3'SS Sequence:

CTCATGTTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTATTATTAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

77.4

37.4

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

78.2

0.64

0.9

71.3

38.3

Minor 5ss

37.2

-1.5

49.1

46.7

Minor BPS

63.1

0.41

1.7

74.75

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023295

78063822 - 78096324

32503