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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78071896_78073259_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

78071896 - 78073259

Intron Length:

1364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTAGC

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCTATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TAATATTTACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

76.2

39.9

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

75.6

0.58

0.9

74.1

35.7

Minor 5ss

34.7

-1.7

45.3

42.8

Minor BPS

53.1

0.18

1.8

70.78

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023295

78063822 - 78096324

32503

ENSAPLT00000003149

78054816 - 78096324

41509