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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78079657_78080009_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78079657 - 78080009

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TGAATCTGAACT

Flanking Amino Acid:

YDDENGSYLKVLHDHIAYRY

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

74.6

0.61

1.4

34.5

Major PPT

84.3

0.77

0.9

86.8

24.4

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

0.45

1.5

75.54

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023295

78063822 - 78096324

32503

ENSAPLT00000003149

78054816 - 78096324

41509