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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78087775_78089334_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78087775 - 78089334

Intron Length:

1560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGCAGA

5'SS Class:

major

3'SS Sequence:

TTTTTTGTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTTTTTTACAT

Flanking Amino Acid:

FGSSCYEHQRVYTYVQSRFY

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.2

62.7

43.2

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

92.2

0.95

0.7

88.3

28.9

Minor 5ss

41.2

-1

2.5

49.8

46.1

Minor BPS

64.8

0.54

1.7

84.29

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023295

78063822 - 78096324

32503

ENSAPLT00000003149

78054816 - 78096324

41509