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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78091389_78095475_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

78091389 - 78095475

Intron Length:

4087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGGATTTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

TGTTGAATAACT

Flanking Amino Acid:

GFLDFLKGCLMWEPAQRMTP

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

75.8

28.9

Major BPS

0.55

1.1

63.4

44.3

Major PPT

59.3

0.21

1.2

60.7

43.9

Minor 5ss

37.5

-1.4

2.8

46.1

42.2

Minor BPS

50.2

0.09

2.3

79.33

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023295

78063822 - 78096324

32503

ENSAPLT00000003149

78054816 - 78096324

41509