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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78104661_78107070_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78104661 - 78107070

Intron Length:

2410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

CTTCCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCTAT

U12 Branch Point Sequence:

GCTTCTACCACT

Flanking Amino Acid:

VFSNGSIYFSDFHVVDDATL

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

68.3

39.3

Major BPS

56.2

0.15

1.3

54.7

42.5

Major PPT

87.7

0.85

0.7

80.1

31.9

Minor 5ss

42.5

-0.8

2.8

59.1

45.4

Minor BPS

-0.3

2.2

65.65

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019383

78104304 - 78118679

14376

ENSAPLT00000003175

78104304 - 78118679

14376