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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78111854_78113594_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78111854 - 78113594

Intron Length:

1741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGACTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TTTTTTTGGACT

Flanking Amino Acid:

GLCNSSQFDEMNGTPVPDLH

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

35.2

Major BPS

69.1

0.47

60.7

37.6

Major PPT

77.6

0.62

0.9

70.8

39.8

Minor 5ss

32.6

-2

3.3

40.4

Minor BPS

69.1

0.68

1.4

87.11

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003175

78104304 - 78118679

14376

ENSAPLT00000019383

78104304 - 78118679

14376