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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78116123_78116315_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

78116123 - 78116315

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTATGTTCA

5'SS Class:

weak_major

3'SS Sequence:

CTGTGTTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

ATGGAATGACCT

Flanking Amino Acid:

DMKEILVIKPGDEILVECNF

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

64.4

36.2

Major BPS

0.72

38.9

Major PPT

0.54

0.9

65.9

40.9

Minor 5ss

48.8

-0.1

2.3

64.3

Minor BPS

40.2

-0.6

57.46

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003175

78104304 - 78118679

14376

ENSAPLT00000019383

78104304 - 78118679

14376