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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78116376_78117230_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78116376 - 78117230

Intron Length:

855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTTTC

5'SS Class:

major

3'SS Sequence:

TATGTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TCATCCTTATGT

Flanking Amino Acid:

QTLDRSGITFAGPSTMNEMC

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

32.4

Major BPS

74.6

0.61

1.4

34.5

Major PPT

83.3

0.75

0.9

77.3

36.6

Minor 5ss

47.3

-0.3

2.8

67.6

37.4

Minor BPS

60.2

0.4

1.9

76.5

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019383

78104304 - 78118679

14376

ENSAPLT00000003175

78104304 - 78118679

14376