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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78132532_78133160_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78132532 - 78133160

Intron Length:

629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

GAAGTATTAGCA

Flanking Amino Acid:

LVTIDNKKELDYLISQSMSD

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

0.9

31.9

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

88.1

0.86

0.6

81.5

30.4

Minor 5ss

35.3

-1.7

3.1

45.7

43.4

Minor BPS

44.6

-0.4

1.8

51.29

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034476

78124238 - 78134217

9980