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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78144121_78144271_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

78144121 - 78144271

Intron Length:

151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTATTAAAG

5'SS Class:

weak_major

3'SS Sequence:

CAGCCTGGTCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

TTGTCAGTTATA

Flanking Amino Acid:

MNFIQSLETM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

1.1

59.1

39.3

Major BPS

71.2

0.53

37.5

Major PPT

49.1

-0

1.2

44.2

41.2

Minor 5ss

41.4

-1

2.9

53.3

43.9

Minor BPS

-0.4

2.4

63.97

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030849

78139902 - 78144273

4372