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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78172355_78173516_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78172355 - 78173516

Intron Length:

1162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATTGTAC

5'SS Class:

major

3'SS Sequence:

CTTGTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAA

U12 Branch Point Sequence:

AATTGCTTAAGC

Flanking Amino Acid:

GCSRSEISVSGCKQQRSTWF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.1

57.3

36.1

Major BPS

67.1

0.42

1.1

57.7

41.3

Major PPT

85.1

0.79

0.8

76.7

37.4

Minor 5ss

43.3

-0.7

3.1

55.1

44.7

Minor BPS

58.1

0.24

2.1

69.89

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037150

78168339 - 78179739

11401