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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78224484_78225278_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

78224484 - 78225278

Intron Length:

795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGAGTGCA

5'SS Class:

major

3'SS Sequence:

ATTTGAACAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTATTTGAACA

Flanking Amino Acid:

VIFILIGVILYSPALLDLEP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

73.2

30.8

Major BPS

83.9

0.84

73.9

41.3

Major PPT

52.5

0.06

1.2

51.8

40.5

Minor 5ss

-2.3

3.1

37.1

40.4

Minor BPS

65.8

0.49

1.4

76.56

34.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017804

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028098

78224024 - 78228250

4227

ENSAPLT00000019446

78224024 - 78226675

2652