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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78225827_78226542_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

78225827 - 78226542

Intron Length:

716

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGCTTT

5'SS Class:

weak_major

3'SS Sequence:

CTTGGCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TCTGCTCTAATT

Flanking Amino Acid:

WVNGESLNTNLFHVNISDDG

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.1

68.2

39.3

Major BPS

82.2

0.8

0.9

81.6

Major PPT

76.4

0.59

0.9

73.4

37.1

Minor 5ss

47.3

-0.3

3.1

74.4

41.8

Minor BPS

58.1

0.33

1.8

75.83

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017804

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028098

78224024 - 78228250

4227

ENSAPLT00000019446

78224024 - 78226675

2652