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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78226647_78228224_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78226647 - 78228224

Intron Length:

1578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTCAGTTTG

5'SS Class:

major

3'SS Sequence:

TTTTTTTGTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATGAT

U12 Branch Point Sequence:

AAGTCATGATTT

Flanking Amino Acid:

SSQRNWLCTLAENTVGQT*

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.56

1.3

71.5

41.1

Major BPS

72.1

0.55

1.1

44.2

Major PPT

90.9

0.92

0.8

88.3

28.9

Minor 5ss

39.4

-1.2

2.8

42.6

Minor BPS

45.9

-0.2

1.9

61.96

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017804

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028098

78224024 - 78228250

4227