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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78283626_78286747_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78283626 - 78286747

Intron Length:

3122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GCAATTTTAATT

Flanking Amino Acid:

GAAETEKKVLATKVLGTVKW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

95.4

1.02

0.6

88.7

28.3

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

58.2

0.33

1.3

65.44

39.6

Associated Gene:

Gene:

YBX3

Ensembl Gene ID:

ENSAPLG00000003147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003228

78283376 - 78301549

18174