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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78286812_78293559_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

78286812 - 78293559

Intron Length:

6748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTA

5'SS Class:

strong_major

3'SS Sequence:

AGATGATAGTAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTATGAA

U12 Branch Point Sequence:

GTGCTATGAAGG

Flanking Amino Acid:

NVRNGYGFINRLTNYLRSVG

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

85.8

25.5

Major BPS

63.1

0.33

1.1

55.4

40.3

Major PPT

46.1

-0.2

1.2

43.1

45.5

Minor 5ss

49.9

-0

2.4

66.7

44.7

Minor BPS

41.2

-0.8

1.9

43.41

41.6

Associated Gene:

Gene:

YBX3

Ensembl Gene ID:

ENSAPLG00000003147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003228

78283376 - 78301549

18174