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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78329999_78330680_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78329999 - 78330680

Intron Length:

682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGCCAC

5'SS Class:

major

3'SS Sequence:

CTTCATCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCTTCTTCATCT

Flanking Amino Acid:

MKQPSSCQQAMYNIMKSCWQ

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

65.3

40.8

Major BPS

100

1.24

0.5

100

Major PPT

82.8

0.74

0.8

76.1

32.2

Minor 5ss

40.6

-1.1

3.1

55.5

42.1

Minor BPS

60.6

0.41

1.8

79.81

42.6

Associated Gene:

Gene:

STYK1

Ensembl Gene ID:

ENSAPLG00000003189

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003241

78313435 - 78331428

17994