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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78354332_78356851_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78354332 - 78356851

Intron Length:

2520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TCTGTCTCACCA

Flanking Amino Acid:

SLGPDPVWQEVIVEKAPKAR

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

27.6

Major BPS

84.6

0.86

41.2

Major PPT

73.9

0.54

0.9

66.9

39.3

Minor 5ss

38.2

-1.3

48.6

47.1

Minor BPS

48.5

-0.1

1.9

62.43

44.3

Associated Gene:

Gene:

GABARAPL1

Ensembl Gene ID:

ENSAPLG00000028817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031158

78353127 - 78358580

5454