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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78487441_78487902_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78487441 - 78487902

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGAG

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

CTGTACTGACCT

Flanking Amino Acid:

VGSHFNNALKGGKEGEYSLT

Intron Amino Acid Position:

946

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.3

39.5

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

83.5

0.75

0.8

81.3

36.4

Minor 5ss

37.6

-1.4

3.2

48.7

47.5

Minor BPS

49.1

0.01

69.63

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008721

78466716 - 78495681

28966