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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78515445_78515982_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78515445 - 78515982

Intron Length:

538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATGCC

5'SS Class:

major

3'SS Sequence:

TTCTTTGTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTCTTTTTATT

Flanking Amino Acid:

TNYSFLVEEYVLPKFDVIVT

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

68.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.1

0.74

0.8

76.8

37.4

Minor 5ss

33.4

-1.9

3.2

41.4

40.3

Minor BPS

55.6

0.26

1.6

73.31

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008164

78510312 - 78541658

31347