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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78519177_78519756_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78519177 - 78519756

Intron Length:

580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTAATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TTTGTTTTACTT

Flanking Amino Acid:

EMFDPEISLKATYKTSDQCH

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

79.5

28.2

Major BPS

68.8

0.47

1.2

63.4

Major PPT

70.9

0.47

0.9

70.5

33.9

Minor 5ss

32.3

-2

2.6

35.1

34.3

Minor BPS

59.5

0.38

1.7

78.3

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008164

78510312 - 78541658

31347