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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78521201_78522333_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78521201 - 78522333

Intron Length:

1133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TGATAAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTATCCATACCA

Flanking Amino Acid:

FPVEKCFKNKVQMQFSEKRM

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

74.6

28.6

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

64.9

0.34

60.6

44.4

Minor 5ss

25.3

-2.8

3.2

31.7

42.9

Minor BPS

0.37

1.9

77.47

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008164

78510312 - 78541658

31347