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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78531899_78532366_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78531899 - 78532366

Intron Length:

468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

GGTTCCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

CCTAGCTCAGCT

Flanking Amino Acid:

FGIRDKEGNTWLTAFVYKSF

Intron Amino Acid Position:

1016

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.2

28.9

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

77.3

0.62

0.9

69.9

36.5

Minor 5ss

29.1

-2.4

3.2

36.8

41.9

Minor BPS

43.7

-0.4

2.2

60.64

48.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008164

78510312 - 78541658

31347