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Intron Name: Anas_platyrhynchos_platyrhynchos_1_7853637_7871520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7853637 - 7871520

Intron Length:

17884

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTAA

5'SS Class:

strong_major

3'SS Sequence:

CATTTTCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTCTTCATTT

Flanking Amino Acid:

TIPRLKLSYKDLLLSNSCIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

80.2

30.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

78.7

0.65

0.8

72.8

31.7

Minor 5ss

45.1

-0.5

2.6

58.1

46.5

Minor BPS

62.8

0.48

1.8

83.89

37.6

Associated Gene:

Gene:

SEMA3D

Ensembl Gene ID:

ENSAPLG00000010446

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010992

7837968 - 7952258

114291

ENSAPLT00000026447

7851439 - 7952258

100820