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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78537980_78538331_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78537980 - 78538331

Intron Length:

352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATAC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAC

U12 Branch Point Sequence:

CAGTCCAGACTG

Flanking Amino Acid:

PAKFDIVLISSYTGKRSSSN

Intron Amino Acid Position:

1336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

30.6

Major BPS

61.1

0.28

1.1

69.4

35.9

Major PPT

82.7

0.74

0.9

80.2

37.3

Minor 5ss

38.3

-1.3

50.5

46.1

Minor BPS

41.3

-0.8

1.9

42.08

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008164

78510312 - 78541658

31347