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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78538423_78540048_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78538423 - 78540048

Intron Length:

1626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACTAT

5'SS Class:

strong_major

3'SS Sequence:

CCTTATTTTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATTTCCTTATTT

Flanking Amino Acid:

FVPVKSSLDKLIDGHTVMQV

Intron Amino Acid Position:

1367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

77.3

33.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

73.8

0.54

74.6

33.7

Minor 5ss

44.9

-0.6

64.1

47.4

Minor BPS

77.1

0.93

1.5

90.41

33.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008164

78510312 - 78541658

31347