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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78541239_78541593_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78541239 - 78541593

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAAACAT

U12 Branch Point Sequence:

TCTCCAGGAAAC

Flanking Amino Acid:

PVKIYDYYETEEYAVAQYMS

Intron Amino Acid Position:

1425

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.8

38.5

Major BPS

48.2

-0.1

1.2

55.4

40.4

Major PPT

87.1

0.83

0.7

79.6

32.4

Minor 5ss

38.8

-1.3

3.4

58.1

46.5

Minor BPS

41.2

-0.6

2.3

55.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008164

78510312 - 78541658

31347