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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78552381_78557682_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

78552381 - 78557682

Intron Length:

5302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGCTAC

5'SS Class:

weak_major

3'SS Sequence:

ACCCCCTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CCTTGCTTACCC

Flanking Amino Acid:

LPGNTSPTTEPQYMVLLPFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.8

0.33

1.4

60.6

41.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

70.6

0.46

0.8

61.6

34.2

Minor 5ss

-0.4

2.8

63.4

41.6

Minor BPS

0.07

2.1

65.55

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041074

78552292 - 78589857

37566

ENSAPLT00000006993

78552292 - 78634748

82457