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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78566462_78567171_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

78566462 - 78567171

Intron Length:

710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

ACCACCTGCTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

TTCTCTCCAACC

Flanking Amino Acid:

EAVCEEFVRQADARGCVSDV

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

26.6

Major BPS

71.8

0.54

1.2

32.5

Major PPT

56.8

0.15

0.9

35.8

Minor 5ss

-1.6

2.8

44.6

43.4

Minor BPS

55.6

0.15

1.9

71.2

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006993

78552292 - 78634748

82457

ENSAPLT00000041074

78552292 - 78589857

37566