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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78572243_78572581_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78572243 - 78572581

Intron Length:

339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTGGGGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

GCTGCTTTAACC

Flanking Amino Acid:

FQVESCLPNKVSLSFIPKEG

Intron Amino Acid Position:

569

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

76.8

33.7

Major BPS

77.3

0.68

79.3

29.4

Major PPT

72.9

0.52

1.1

65.2

45.5

Minor 5ss

31.3

-2.1

2.7

33.6

35.4

Minor BPS

68.8

0.57

1.4

70.5

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006993

78552292 - 78634748

82457

ENSAPLT00000041074

78552292 - 78589857

37566