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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78584539_78584827_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78584539 - 78584827

Intron Length:

289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGACAT

U12 Branch Point Sequence:

ATGACATCTACT

Flanking Amino Acid:

SGTLLNNAMKGGVDNEVSLT

Intron Amino Acid Position:

1099

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

79.6

29.2

Major BPS

58.8

0.22

1.2

66.8

39.9

Major PPT

0.76

0.8

78.1

30.7

Minor 5ss

39.7

-1.2

3.1

56.3

47.9

Minor BPS

-0.3

2.1

65.02

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041074

78552292 - 78589857

37566

ENSAPLT00000006993

78552292 - 78634748

82457