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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78588443_78589019_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78588443 - 78589019

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCGCC

5'SS Class:

major

3'SS Sequence:

TTTCTTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTAAAAT

U12 Branch Point Sequence:

AGCTCAGTAAAA

Flanking Amino Acid:

FIPVKSSVRKLQQRLGIERT

Intron Amino Acid Position:

1400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

68.2

38.6

Major BPS

52.8

0.07

1.3

61.7

41.5

Major PPT

93.4

0.98

0.5

92.6

17.4

Minor 5ss

36.2

-1.6

3.5

50.4

46.4

Minor BPS

44.9

-0.3

2.3

57.16

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041074

78552292 - 78589857

37566

ENSAPLT00000006993

78552292 - 78634748

82457