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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78589089_78589527_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78589089 - 78589527

Intron Length:

439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAG

U12 Branch Point Sequence:

GCACCCCTAAGC

Flanking Amino Acid:

TNHVLVYLEKLNSETLSFSF

Intron Amino Acid Position:

1423

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.7

84.8

25.1

Major BPS

48.3

-0.1

1.5

55.2

38.9

Major PPT

79.9

0.67

0.7

72.6

32.1

Minor 5ss

31.8

-2.1

3.3

42.9

44.7

Minor BPS

46.8

-0.2

54.46

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041074

78552292 - 78589857

37566

ENSAPLT00000006993

78552292 - 78634748

82457