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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78597237_78597765_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78597237 - 78597765

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

CCGTCTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTAAC

U12 Branch Point Sequence:

GGTGCCGGGACC

Flanking Amino Acid:

NPNGGFSSTQDTVVALQALS

Intron Amino Acid Position:

1022

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

77.5

32.9

Major BPS

51.7

0.04

1.3

55.3

40.3

Major PPT

78.6

0.64

0.8

72.5

32.2

Minor 5ss

34.2

-1.8

2.9

42.1

Minor BPS

44.1

-0.4

2.2

56.05

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003658

78592681 - 78615660

22980