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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78626479_78627469_R


Intron Information:

Intron Rank:
4

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
78626479 - 78627469

Intron Length:
991

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
ATG|GCACCCAGT

5'SS Class:
weak_major

3'SS Sequence:
TCTCTTTGCAGAG|T

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
GACTCAT

U12 Branch Point Sequence:
TTCTCTCAGACT

Flanking Amino Acid:
WIWEDGSILNVLSNSPVQQC

Intron Amino Acid Position:
135

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
58.7
0.21
1.3
57.9
46.3

Major BPS
69.4
0.48
1.2
71.6
36.4

Major PPT
56.7
0.15
1.7
67.4
37.9

Minor 5ss
35.4
-1.7
4.2
54.7
44.4

Minor BPS
49.9
0.08
2
75.42
41.9

Associated Gene:

Gene:
KLRG1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

78626369 - 78630562
4194

78626369 - 78631514
5146