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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78631383_78631436_R


Intron Information:

Intron Rank:
1

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
78631383 - 78631436

Intron Length:
54

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGT|GTAGGATTG

5'SS Class:
weak_major

3'SS Sequence:
CTGTGTATCTAAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AACACAA

U12 Branch Point Sequence:
CGTAACACAACT

Flanking Amino Acid:
CPTERDVDERLVNRMLRLNL

Intron Amino Acid Position:
27

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
60.3
0.24
1.2
56.3
43.6

Major BPS
51.9
0.05
0.9
59
27.3

Major PPT
61.2
0.25
1.1
64.3
40.6

Minor 5ss
42.1
-0.9
3.4
56.2
47.9

Minor BPS
45.1
-0.2
2
64.41
44.9

Associated Gene:

Gene:
KLRG1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

78626369 - 78631514
5146