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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78641796_78641879_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78641796 - 78641879

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGGCCA

5'SS Class:

major

3'SS Sequence:

TCTCTCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

GGATTTGCAACC

Flanking Amino Acid:

RINETQVFNGSDWIMLIYKG

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

39.6

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

0.65

0.9

76.3

32.2

Minor 5ss

32.7

-2

3.3

40.2

39.6

Minor BPS

43.7

-0.4

2.1

52.48

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047972

78640215 - 78643838

3624

ENSAPLT00000017295

78640215 - 78643787

3573