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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78641990_78642191_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78641990 - 78642191

Intron Length:

202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTAAATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTCCTAAATT

Flanking Amino Acid:

MISCKRGVMASSFSIVSEER

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

73.7

0.53

0.9

66.5

38.1

Minor 5ss

-2.5

3.1

35.2

41.4

Minor BPS

80.6

1.04

1.5

95.75

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017295

78640215 - 78643787

3573

ENSAPLT00000047972

78640215 - 78643838

3624