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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78642323_78642856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78642323 - 78642856

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTCAC

5'SS Class:

major

3'SS Sequence:

TTCTGCCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGACTTTTAATT

Flanking Amino Acid:

HLSVGSILLITFASVIAVYI

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.3

68.4

38.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.3

0.66

0.8

36.6

Minor 5ss

30.4

-2.2

2.8

34.8

34.1

Minor BPS

65.6

0.57

1.2

74.54

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017295

78640215 - 78643787

3573