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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78642984_78643552_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78642984 - 78643552

Intron Length:

569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATAAC

U12 Branch Point Sequence:

AGTGCAATAACC

Flanking Amino Acid:

FWQDLGNLVADGCDFVCRSK

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.1

31.6

Major BPS

57.8

0.19

1.1

59.6

32.6

Major PPT

75.9

0.58

0.9

68.6

37.3

Minor 5ss

-2.6

31.7

42.6

Minor BPS

49.1

-0

64.19

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017295

78640215 - 78643787

3573