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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78647609_78647865_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78647609 - 78647865

Intron Length:

257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTTA

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTTTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

TGTTTCTCAGTG

Flanking Amino Acid:

EVYEFIASLQGCQEIAEEFR

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.8

80.9

28.8

Major BPS

0.52

1.5

79.6

35.6

Major PPT

81.1

0.7

0.8

76.1

32.4

Minor 5ss

34.9

-1.7

3.4

46.2

49.1

Minor BPS

-0.1

1.8

60.06

42.1

Associated Gene:

Gene:

PHC1

Ensembl Gene ID:

ENSAPLG00000002713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020347

78647114 - 78660555

13442

ENSAPLT00000002782

78647454 - 78660555

13102